A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3552581



Internal ID22421475
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:129520547..129520547hg38UCSC Ensembl
chr10:131318811..131318811hg19UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg3868
hg1968
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14415320
SamplesHG00514
Known GenesMGMT
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3552581
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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