A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3552196



Internal ID22421094
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:82337122..82527079hg38UCSC Ensembl
chr15:82629476..83195830hg19UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg38189958
hg19566355
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14455300, nssv14459901
SamplesHG00513, HG00514
Known GenesADAMTS7P1, CSPG4P8, GOLGA6L10, GOLGA6L20, GOLGA6L9, LOC727751, LOC80154, RPS17, RPS17L, UBE2Q2P2, UBE2Q2P3
MethodSequencing
AnalysisSingle strand sequencing, and assortment analysis
PlatformStrand-seq
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3552196
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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