A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3552103



Internal ID22421004
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:14769189..15377775hg38UCSC Ensembl
chr16:14863046..15471632hg19UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38608587
hg19608587
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14461301, nssv14452763, nssv14466245, nssv14456077, nssv14467382, nssv14457759, nssv14463272, nssv14453405, nssv14460290
SamplesHG00512, NA19238, NA19239, HG00731, HG00732, NA19240, HG00733, HG00513, HG00514
Known GenesABCC6P2, LOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR3180-4, MIR6511A-2, MIR6511B-1, MIR6770-2, NOMO1, NPIPA1, NPIPA5, NTAN1, PDXDC1, RRN3
MethodSequencing
AnalysisSingle strand sequencing, and assortment analysis
PlatformStrand-seq
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3552103
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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