A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3551639



Internal ID22420546
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:69491111..69491111hg38UCSC Ensembl
chr17:67487252..67487252hg19UCSC Ensembl
Cytoband17q24.3
Allele length
AssemblyAllele length
hg3852
hg1952
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14390503, nssv14418679
SamplesNA19240, HG00514
Known GenesMAP2K6
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3551639
Frequency
Sample Size9
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


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