A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3549668



Internal ID22418610
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr8:101509173..101509173hg38UCSC Ensembl
chr8:102521401..102521401hg19UCSC Ensembl
Cytoband8q22.3
Allele length
AssemblyAllele length
hg3868
hg1968
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14402143
SamplesNA19240
Known GenesGRHL2
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3549668
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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