A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3546960



Internal ID22415940
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:86278815..86278815hg38UCSC Ensembl
chr16:86312421..86312421hg19UCSC Ensembl
Cytoband16q24.1
Allele length
AssemblyAllele length
hg38122
hg19122
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14377155
SamplesNA19240
Known GenesLINC01081
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3546960
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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