A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3546050



Internal ID22415050
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:39822327..40678269hg38UCSC Ensembl
chr9:41967345..42613955hg19UCSC Ensembl
Cytoband9p12
Allele length
AssemblyAllele length
hg38855943
hg19646611
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14459513, nssv14456251, nssv14456272, nssv14465072, nssv14464160, nssv14460676, nssv14458920, nssv14465172, nssv14459209
SamplesHG00512, NA19238, NA19239, HG00731, HG00732, NA19240, HG00733, HG00513, HG00514
Known GenesANKRD20A2, ANKRD20A3, FAM95B1, KGFLP2, LOC643648
MethodSequencing
AnalysisSingle strand sequencing, and assortment analysis
PlatformStrand-seq
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3546050
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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