A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3542474



Internal ID22411551
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:89339601..89339601hg38UCSC Ensembl
chr6:90049320..90049320hg19UCSC Ensembl
Cytoband6q15
Allele length
AssemblyAllele length
hg3867
hg1967
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14401184
SamplesNA19240
Known GenesUBE2J1
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3542474
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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