A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3540927



Internal ID22410050
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:39571440..39571440hg38UCSC Ensembl
chr3:39612931..39612931hg19UCSC Ensembl
Cytoband3p22.1
Allele length
AssemblyAllele length
hg3861
hg1961
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14397011
SamplesNA19240
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3540927
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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