A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3538



Internal ID15201471
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:43847793..43877278hg38UCSC Ensembl
Outerchr21:45267674..45297159hg19UCSC Ensembl
Outerchr21:44092102..44121587hg18UCSC Ensembl
Outerchr21:44092102..44121587hg17UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg3829486
hg1929486
hg1829486
hg1729486
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7727
SamplesNA12156
Known GenesAGPAT3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3538
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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