A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3534624



Internal ID22403899
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:168119205..168119205hg38UCSC Ensembl
chr1:168088443..168088443hg19UCSC Ensembl
Cytoband1q24.2
Allele length
AssemblyAllele length
hg38140
hg19140
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14387130
SamplesNA19240
Known GenesGPR161
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3534624
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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