A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3531956



Internal ID22401299
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:13682069..13682069hg38UCSC Ensembl
chr3:13723568..13723568hg19UCSC Ensembl
Cytoband3p25.1
Allele length
AssemblyAllele length
hg3852
hg1952
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14395853
SamplesNA19240
Known GenesLINC00620
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences detected as low complexity by RepeatMasker/3.3.0
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3531956
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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