A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3531156



Internal ID22400520
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:55696738..55696738hg38UCSC Ensembl
chr5:54992566..54992566hg19UCSC Ensembl
Cytoband5q11.2
Allele length
AssemblyAllele length
hg38186
hg19186
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14399794
SamplesNA19240
Known GenesSLC38A9
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3531156
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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