A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3530195



Internal ID22399584
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:123260507..123260507hg38UCSC Ensembl
chrX:122394358..122394358hg19UCSC Ensembl
CytobandXq25
Allele length
AssemblyAllele length
hg3861
hg1961
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14467217
SamplesHG00733
Known GenesGRIA3
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3530195
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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