A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3523720



Internal ID22393148
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:33556224..33556545hg38UCSC Ensembl
chr2:33781291..33781612hg19UCSC Ensembl
Cytoband2p22.3
Allele length
AssemblyAllele length
hg38322
hg19322
Variant TypeCNV alu deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv4544n152
Supporting Variantsnssv14292263, nssv14292267, nssv14292266, nssv14292265, nssv14292268, nssv14292264
SamplesNA19238, NA19239, HG00731, HG00732, NA19240, HG00733
Known GenesRASGRP3
MethodSequencing
AnalysisMultiple analysis algorthms
PlatformIllumina HiSeq
CommentsAbsence of a ALUYB8 mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3523720
Frequency
Sample Size9
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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