A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3522392



Internal ID22391813
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:173333861..173334171hg38UCSC Ensembl
chr2:174198589..174198899hg19UCSC Ensembl
Cytoband2q31.1
Allele length
AssemblyAllele length
hg38311
hg19311
Variant TypeCNV alu deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv4901n152
Supporting Variantsnssv14295602, nssv14295600, nssv14295596, nssv14295595, nssv14295597, nssv14295601, nssv14295598, nssv14295599
SamplesNA19238, NA19239, HG00731, HG00732, NA19240, HG00733, HG00513, HG00514
Known Genes
MethodSequencing
AnalysisMultiple analysis algorthms
PlatformIllumina HiSeq
CommentsAbsence of a ALUYB9 mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3522392
Frequency
Sample Size9
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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