A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3522235



Internal ID22391655
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:216025382..216025382hg38UCSC Ensembl
chr1:216198724..216198724hg19UCSC Ensembl
Cytoband1q41
Allele length
AssemblyAllele length
hg38322
hg19322
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14378949
SamplesNA19240
Known GenesUSH2A
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsInsertion of a AluY mobile element relative to the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3522235
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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