A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3519871



Internal ID22389278
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:122934025..122934025hg38UCSC Ensembl
chr3:122652872..122652872hg19UCSC Ensembl
Cytoband3q21.1
Allele length
AssemblyAllele length
hg38878
hg19878
Variant TypeCNV alu insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14451172
SamplesHG00733
Known GenesSEMA5B
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsInsertion of a AluS mobile element relative to the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3519871
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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