A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3446



Internal ID15201370
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:63237764..63282515hg38UCSC Ensembl
Outerchr20:61869116..61913867hg19UCSC Ensembl
Outerchr20:61339561..61384312hg18UCSC Ensembl
Outerchr20:61339561..61384312hg17UCSC Ensembl
Cytoband20q13.33
Allele length
AssemblyAllele length
hg3844752
hg1944752
hg1844752
hg1744752
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7702
SamplesNA12156
Known GenesARFGAP1, BIRC7, FLJ16779, MIR3196, NKAIN4
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3446
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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