A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3409



Internal ID15201329
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:15809988..15852694hg38UCSC Ensembl
Outerchr1:16136483..16179189hg19UCSC Ensembl
Outerchr1:16009070..16051776hg18UCSC Ensembl
Outerchr1:15881789..15924495hg17UCSC Ensembl
Cytoband1p36.21
Allele length
AssemblyAllele length
hg3842707
hg1942707
hg1842707
hg1742707
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv8042
SamplesNA12156
Known GenesFLJ37453, SPEN
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv3409
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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