A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3299828



Internal ID22389013
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:17419494..17419560hg38UCSC Ensembl
chr22:17898541..17898607hg19UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg3867
hg1967
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv5663n152
Supporting Variantsnssv14410073
SamplesNA19240
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3299828
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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