A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3297973



Internal ID22388746
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:51495246..51495297hg38UCSC Ensembl
chr19:51998500..51998551hg19UCSC Ensembl
Cytoband19q13.41
Allele length
AssemblyAllele length
hg3852
hg1952
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14432328
SamplesHG00514
Known GenesSIGLEC12
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3297973
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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