A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3297268



Internal ID22388663
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:46389363..46389415hg38UCSC Ensembl
chr19:46892620..46892672hg19UCSC Ensembl
Cytoband19q13.32
Allele length
AssemblyAllele length
hg3853
hg1953
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv4290n152
Supporting Variantsnssv14432299
SamplesHG00514
Known GenesPPP5C
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3297268
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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