A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3288274



Internal ID22386687
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:26785052..26785223hg38UCSC Ensembl
chr12:26937985..26938156hg19UCSC Ensembl
Cytoband12p11.23
Allele length
AssemblyAllele length
hg38172
hg19172
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14447540
SamplesHG00733
Known GenesITPR2
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3288274
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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