A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3285007



Internal ID22383379
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:69409866..69409918hg38UCSC Ensembl
chr10:71169622..71169674hg19UCSC Ensembl
Cytoband10q22.1
Allele length
AssemblyAllele length
hg3853
hg1953
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv976n152
Supporting Variantsnssv14437351
SamplesHG00733
Known GenesTACR2
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3285007
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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