A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3284540



Internal ID22382905
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:21981123..21981176hg38UCSC Ensembl
chr9:21981122..21981175hg19UCSC Ensembl
Cytoband9p21.3
Allele length
AssemblyAllele length
hg3854
hg1954
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14439356
SamplesHG00514
Known GenesCDKN2A
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3284540
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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