A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3284016



Internal ID22382373
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:110648146..110648198hg38UCSC Ensembl
chr11:110518869..110518921hg19UCSC Ensembl
Cytoband11q23.1
Allele length
AssemblyAllele length
hg3853
hg1953
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14375816, nssv14447190
SamplesNA19240, HG00733
Known GenesARHGAP20
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3284016
Frequency
Sample Size9
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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