A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3282589



Internal ID22380924
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:24251373..24251467hg38UCSC Ensembl
chr2:24474242..24474336hg19UCSC Ensembl
Cytoband2p23.3
Allele length
AssemblyAllele length
hg3895
hg1995
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv4521n152
Supporting Variantsnssv14407034
SamplesNA19240
Known GenesITSN2
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3282589
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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