A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3282354



Internal ID22380688
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:5667637..5667833hg38UCSC Ensembl
chr1:5727697..5727893hg19UCSC Ensembl
Cytoband1p36.31
Allele length
AssemblyAllele length
hg38197
hg19197
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv81n152
Supporting Variantsnssv14387408
SamplesNA19240
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3282354
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer