A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3281493



Internal ID22379819
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:162936496..162936547hg38UCSC Ensembl
chr1:162906286..162906337hg19UCSC Ensembl
Cytoband1q23.3
Allele length
AssemblyAllele length
hg3852
hg1952
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14406135
SamplesNA19240
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3281493
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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