A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3281239



Internal ID22379560
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:61282317..61282437hg38UCSC Ensembl
chr5:60578144..60578264hg19UCSC Ensembl
Cytoband5q12.1
Allele length
AssemblyAllele length
hg38121
hg19121
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14436083
SamplesHG00514
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsSequences at least 70% masked by tandem repeat finder or contained within a tandem repeat
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3281239
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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