A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3273716



Internal ID22377671
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:114787596..114787674hg38UCSC Ensembl
chr10:116547355..116547433hg19UCSC Ensembl
Cytoband10q25.3
Allele length
AssemblyAllele length
hg3879
hg1979
Variant TypeCNV sva deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14440896
SamplesHG00733
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsAbsence of a SVA mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3273716
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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