A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3271110



Internal ID22377541
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:27003831..27003960hg38UCSC Ensembl
chr15:27248978..27249107hg19UCSC Ensembl
Cytoband15q12
Allele length
AssemblyAllele length
hg38130
hg19130
Variant TypeCNV sva deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14405751
SamplesNA19240
Known GenesGABRG3
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsAbsence of a SVA mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3271110
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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