A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3245668



Internal ID22376209
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:174211644..174211763hg38UCSC Ensembl
chr3:173929434..173929553hg19UCSC Ensembl
Cytoband3q26.31
Allele length
AssemblyAllele length
hg38120
hg19120
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14423155, nssv14451499
SamplesHG00733, HG00514
Known GenesNLGN1
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsInsertion variant involving LTR satellite DNA
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3245668
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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