A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3240015



Internal ID22374584
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:87630619..87630706hg38UCSC Ensembl
chr15:88173850..88173937hg19UCSC Ensembl
Cytoband15q25.3
Allele length
AssemblyAllele length
hg3888
hg1988
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14430901
SamplesHG00514
Known Genes
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsDeletion variant involving LTR satellite DNA
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3240015
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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