A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3198856



Internal ID22348529
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:6932360..6932496hg38UCSC Ensembl
chr6:6932593..6932729hg19UCSC Ensembl
Cytoband6p25.1
Allele length
AssemblyAllele length
hg38137
hg19137
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14326627, nssv14411021, nssv14455692, nssv14326628, nssv14326626, nssv14326630, nssv14326629, nssv14326625
SamplesNA19238, NA19239, HG00731, HG00732, NA19240, HG00733
Known Genes
MethodMerging
Sequencing
AnalysisMultiple analysis algorthms
PhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformIllumina HiSeq
See merged experiments
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3198856
Frequency
Sample Size9
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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