A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3177517



Internal ID22334473
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr14:34443376..34443507hg38UCSC Ensembl
chr14:34912582..34912713hg19UCSC Ensembl
Cytoband14q13.1
Allele length
AssemblyAllele length
hg38132
hg19132
Variant TypeCNV alu deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14430091
SamplesHG00514
Known GenesSPTSSA
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
CommentsAbsence of a AluS mobile element insertion that is present in the reference
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3177517
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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