A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3172279



Internal ID22331729
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:152747398..152763976hg38UCSC Ensembl
chrX:151915924..151932492hg19UCSC Ensembl
CytobandXq28
Allele length
AssemblyAllele length
hg3816579
hg1916569
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14458119
SamplesHG00733
Known GenesCSAG2, CSAG3, MAGEA2, MAGEA2B
MethodMerging
AnalysisPhasedSV,MsPAC, Multiple Illumina callers, BioNano Genomics software
PlatformSee merged experiments
Comments
ReferenceChaisson_et_al_2019
Pubmed ID30992455
Accession Number(s)nsv3172279
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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