A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3170280



Internal ID21314341
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:76598900..76603434hg38UCSC Ensembl
Outerchr15:76586021..76609838hg38UCSC Ensembl
Innerchr15:76891241..76895775hg19UCSC Ensembl
Outerchr15:76878362..76902179hg19UCSC Ensembl
Innerchr15:74678296..74682830hg18UCSC Ensembl
Outerchr15:74665417..74689234hg18UCSC Ensembl
Cytoband15q24.3
Allele length
AssemblyAllele length
hg3823818
hg1923818
hg1823818
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14244759, nssv14245300, nssv14252467, nssv14250357, nssv14247632, nssv14250596, nssv14245553, nssv14249445, nssv14250911, nssv14244028, nssv14246778, nssv14251747
SamplesMLY_15, MLY_1, NGO_4, NGO_14, NGO_30, PML_2, NGO_6, MLY_3, MLY_8, MLY_4, NGO_7, NGO_15
Known GenesSCAPER
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3170280
Frequency
Sample Size93
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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