A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3170245



Internal ID21314306
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:25170021..25257284hg38UCSC Ensembl
Outerchr15:25165735..25261432hg38UCSC Ensembl
Innerchr15:25415168..25502431hg19UCSC Ensembl
Outerchr15:25410882..25506579hg19UCSC Ensembl
Innerchr15:22966261..23053524hg18UCSC Ensembl
Outerchr15:22961975..23057672hg18UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3895698
hg1995698
hg1895698
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14249814, nssv14249530, nssv14243667, nssv14248294
SamplesNGO_24, NGO_26, NGO_25, NGO_23
Known GenesPWAR4, SNORD115-1, SNORD115-10, SNORD115-11, SNORD115-12, SNORD115-13, SNORD115-14, SNORD115-15, SNORD115-16, SNORD115-17, SNORD115-18, SNORD115-19, SNORD115-2, SNORD115-20, SNORD115-21, SNORD115-22, SNORD115-23, SNORD115-24, SNORD115-25, SNORD115-26, SNORD115-27, SNORD115-28, SNORD115-29, SNORD115-3, SNORD115-30, SNORD115-31, SNORD115-32, SNORD115-33, SNORD115-34, SNORD115-35, SNORD115-36, SNORD115-37, SNORD115-38, SNORD115-39, SNORD115-4, SNORD115-40, SNORD115-41, SNORD115-42, SNORD115-43, SNORD115-44, SNORD115-5, SNORD115-6, SNORD115-7, SNORD115-8, SNORD115-9
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3170245
Frequency
Sample Size93
Observed Gain4
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer