A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3170145



Internal ID21314206
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:175960543..176223481hg38UCSC Ensembl
Outerchr5:175946505..176234121hg38UCSC Ensembl
Innerchr5:175387546..175650484hg19UCSC Ensembl
Outerchr5:175373508..175661124hg19UCSC Ensembl
Innerchr5:175320152..175583090hg18UCSC Ensembl
Outerchr5:175306114..175593730hg18UCSC Ensembl
Cytoband5q35.2
Allele length
AssemblyAllele length
hg38287617
hg19287617
hg18287617
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14250112, nssv14251213
SamplesSNI_5, NGO_38
Known GenesFAM153B, LOC100507387, LOC100996385, LOC643201, THOC3
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3170145
Frequency
Sample Size93
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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