A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3169836



Internal ID21313647
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:58957329..59094621hg38UCSC Ensembl
Outerchr11:58956908..59097071hg38UCSC Ensembl
Innerchr11:58724802..58862094hg19UCSC Ensembl
Outerchr11:58724381..58864544hg19UCSC Ensembl
Innerchr11:58481378..58618670hg18UCSC Ensembl
Outerchr11:58480957..58621120hg18UCSC Ensembl
Cytoband11q12.1
Allele length
AssemblyAllele length
hg38140164
hg19140164
hg18140164
Variant TypeCNV duplication
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14241821, nssv14249258, nssv14243182, nssv14242837, nssv14247366, nssv14246147, nssv14243166, nssv14244594, nssv14247815, nssv14244887, nssv14243072, nssv14251654, nssv14243923, nssv14243036, nssv14247249, nssv14252303, nssv14248640, nssv14251103, nssv14250896, nssv14249408, nssv14241678, nssv14245711, nssv14245500
SamplesMLY_15, SNI_17, MLY_6, MLY_5, SNI_13, MLY_1, SNI_10, NGO_43, NGO_54, NGO_50, NGO_39, NGO_47, MLY_2, MLY_3, MLY_8, SNI_12, NGO_1, NGO_49, NGO_42, MLY_10, MLY_14, SNI_4
Known GenesGLYATL1, LOC283194
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3169836
Frequency
Sample Size93
Observed Gain22
Observed Loss0
Observed Complex0
Frequencyn/a


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