Variant Details

Variant: nsv3169696

Internal ID

21313507

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr11:4217824..4338058	hg38	UCSC Ensembl
Outer	chr11:4217176..4363567	hg38	UCSC Ensembl
Inner	chr11:4239054..4359288	hg19	UCSC Ensembl
Outer	chr11:4238406..4384797	hg19	UCSC Ensembl
Inner	chr11:4195630..4315864	hg18	UCSC Ensembl
Outer	chr11:4194982..4341373	hg18	UCSC Ensembl

Cytoband

11p15.4

Allele length

Assembly	Allele length
hg38	146392
hg19	146392
hg18	146392

Variant Type

OTHER complex

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv14246033, nssv14247207, nssv14243766, nssv14247899, nssv14243626, nssv14245391, nssv14251208, nssv14241355, nssv14245116, nssv14248528, nssv14243658, nssv14251647, nssv14247874, nssv14248706, nssv14243436, nssv14245431, nssv14245397, nssv14244938, nssv14242246, nssv14252393, nssv14251241, nssv14248777, nssv14245477, nssv14244234, nssv14241274, nssv14247621, nssv14245062, nssv14245883, nssv14250482, nssv14250778, nssv14247451, nssv14243335, nssv14247543

Samples

NGO_13, NGO_21, MLY_15, SNI_17, NGO_3, SNI_13, SNI_11, NGO_37, NGO_12, MLY_11, SNI_7, NGO_10, NGO_9, NGO_4, MLY_13, NGO_54, NGO_20, NGO_26, MLY_2, PML_2, NGO_2, SNI_16, NGO_25, NGO_55, NGO_23, SNI_6, SNI_15, NGO_5, MLY_4, NGO_7, NGO_51, SNI_4

Known Genes

Method

SNP array

Analysis

Platform

Affymetrix Genome-wide SNP array 6.0

Comments

Reference

Fu_et_al_2018

Pubmed ID

29476164

Accession Number(s)

nsv3169696

Frequency

Sample Size	93
Observed Gain	15
Observed Loss	17
Observed Complex	0
Frequency	n/a