A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3169639



Internal ID21313450
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:157545672..157558146hg38UCSC Ensembl
Outerchr7:157544783..157559061hg38UCSC Ensembl
Innerchr7:157338366..157350840hg19UCSC Ensembl
Outerchr7:157337477..157351755hg19UCSC Ensembl
Innerchr7:157031127..157043601hg18UCSC Ensembl
Outerchr7:157030238..157044516hg18UCSC Ensembl
Cytoband7q36.3
Allele length
AssemblyAllele length
hg3814279
hg1914279
hg1814279
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14244761, nssv14250662, nssv14246414, nssv14251660, nssv14250204, nssv14250986, nssv14249490, nssv14246945, nssv14241623, nssv14249726, nssv14250120, nssv14246864, nssv14242992, nssv14249745, nssv14248947, nssv14244522, nssv14245757, nssv14250727, nssv14241500, nssv14242993
SamplesNGO_22, NGO_28, NGO_32, NGO_46, PML_1, NGO_43, SNI_9, NGO_24, NGO_50, NGO_39, NGO_14, NGO_26, MLY_2, PML_2, NGO_25, NGO_6, PML_4, NGO_23, SNI_5, NGO_51
Known GenesPTPRN2
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3169639
Frequency
Sample Size93
Observed Gain1
Observed Loss19
Observed Complex0
Frequencyn/a


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