A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3169533



Internal ID21313766
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:52994359..53020581hg38UCSC Ensembl
Outerchr3:52989195..53024632hg38UCSC Ensembl
Innerchr3:53028375..53054597hg19UCSC Ensembl
Outerchr3:53023211..53058648hg19UCSC Ensembl
Innerchr3:53003415..53029637hg18UCSC Ensembl
Outerchr3:52998251..53033688hg18UCSC Ensembl
Cytoband3p21.1
Allele length
AssemblyAllele length
hg3835438
hg1935438
hg1835438
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14252171, nssv14242615, nssv14241594, nssv14251866, nssv14241638, nssv14250834, nssv14251316, nssv14248075, nssv14240978, nssv14242594, nssv14250761, nssv14249804, nssv14248002, nssv14250250, nssv14247001
SamplesSNI_17, NGO_22, MLY_5, SNI_8, NGO_32, SNI_9, PML_3, MLY_2, NGO_2, SNI_12, SNI_5, MLY_10, SNI_14, NGO_11, NGO_7
Known GenesSFMBT1
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3169533
Frequency
Sample Size93
Observed Gain0
Observed Loss15
Observed Complex0
Frequencyn/a


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