A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3169498



Internal ID21313981
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30500366..30807423hg38UCSC Ensembl
Outerchr15:30488460..30812612hg38UCSC Ensembl
Innerchr15:30792569..31099626hg19UCSC Ensembl
Outerchr15:30780663..31104815hg19UCSC Ensembl
Innerchr15:28579861..28886918hg18UCSC Ensembl
Outerchr15:28567955..28892107hg18UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg38324153
hg19324153
hg18324153
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14244729, nssv14246763, nssv14245161, nssv14243706, nssv14244573
SamplesNGO_3, NGO_29, NGO_32, NGO_30, NGO_6
Known GenesARHGAP11B, GOLGA8H, LOC100288637, ULK4P1, ULK4P2
MethodSNP array
Analysis
PlatformAffymetrix Genome-wide SNP array 6.0
Comments
ReferenceFu_et_al_2018
Pubmed ID29476164
Accession Number(s)nsv3169498
Frequency
Sample Size93
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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