Variant Details

Variant: nsv3112895

Internal ID

21296161

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr12:42627139..42633491	hg38	UCSC Ensembl
Inner	chr12:43020941..43027293	hg19	UCSC Ensembl

Cytoband

12q12

Allele length

Assembly	Allele length
hg38	6353
hg19	6353

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv255n145

Supporting Variants

nssv14091602, nssv14091558, nssv14091435, nssv14091605, nssv14091458, nssv14092548, nssv14092754, nssv14091213, nssv14092397, nssv14092909, nssv14092622, nssv14092715, nssv14092442, nssv14092738, nssv14091286, nssv14091303, nssv14091572, nssv14093697, nssv14092928, nssv14091613, nssv14093810, nssv14091242, nssv14091392, nssv14093786, nssv14092613, nssv14092454, nssv14092797, nssv14093694, nssv14091593, nssv14093279, nssv14093272, nssv14091447, nssv14092732, nssv14093708, nssv14091317, nssv14091483, nssv14092809, nssv14091669, nssv14091577, nssv14091533, nssv14090350, nssv14093823, nssv14093943, nssv14091655, nssv14093795, nssv14092533, nssv14091204, nssv14093295, nssv14092758, nssv14090358, nssv14093922, nssv14092852, nssv14092663, nssv14092461, nssv14092499, nssv14091544, nssv14091643, nssv14090389, nssv14092718, nssv14092793, nssv14092432, nssv14093872, nssv14093726, nssv14091685, nssv14093720, nssv14091332, nssv14093768, nssv14092893, nssv14091454, nssv14092843, nssv14091249, nssv14091197, nssv14092411, nssv14093300, nssv14091347, nssv14091473

Samples

sample425, sample98, sample70, sample133, sample373, sample83, sample317, sample11, sample266, sample237, sample370, sample365, sample420, sample9, sample142, sample218, sample82, sample42, sample285, sample208, sample202, sample95, sample360, sample143, sample128, sample363, sample129, sample41, sample186, sample76, sample178, sample307, sample216, sample213, sample19, sample108, sample345, sample332, sample244, sample416, sample153, sample81, sample157, sample407, sample424, sample343, sample118, sample339, sample304, sample92, sample79, sample418, sample61, sample233, sample43, sample253, sample175, sample68, sample112, sample245, sample117, sample47, sample331, sample278, sample21, sample391, sample73, sample89, sample250, sample172, sample188, sample36, sample113, sample46, sample162, sample110

Known Genes

Method

Oligo aCGH

Analysis

Platform

Comments

Reference

Lu_et_al_2017

Pubmed ID

28705883

Accession Number(s)

nsv3112895

Frequency

Sample Size	467
Observed Gain	0
Observed Loss	76
Observed Complex	0
Frequency	n/a