A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3066378



Internal ID21197769
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:16267191..16268350hg38UCSC Ensembl
chr12:16420125..16421284hg19UCSC Ensembl
Cytoband12p12.3
Allele length
AssemblyAllele length
hg381160
hg191160
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14036717
SamplesCHM1
Known GenesSLC15A5
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)nsv3066378
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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