A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3060001



Internal ID21191692
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:66735539..66735871hg38UCSC Ensembl
chr1:67201222..67201554hg19UCSC Ensembl
Cytoband1p31.3
Allele length
AssemblyAllele length
hg38333
hg19333
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv26n140
Supporting Variantsnssv14018840
SamplesCHM1
Known GenesSGIP1
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)nsv3060001
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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