A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv3056400



Internal ID21188302
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:6429029..6429029hg38UCSC Ensembl
chr19:6429040..6429040hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg3873
hg1973
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14028898
SamplesNA12878
Known GenesSLC25A41
MethodSequencing
AnalysisCombines the NGS (e.g., Illumina) and SMS (e.g., Pacbio) for detecting large and small SVs (parameters the same as commit eee31f6 of https://bitbucket.org/xianfan/hybridassemblysv)
Platform
Comments
ReferenceFan_et_al_2017
Pubmed ID28104618
Accession Number(s)nsv3056400
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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